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Changelog

Source: NEWS.md

OpenSpecy 1.0.8

CRAN release: 2024-03-14

Minor Improvements

  • updated manage_na, spec_res, read_any for easier flow with the app

OpenSpecy 1.0.7

CRAN release: 2024-03-11

Minor Improvements

  • Modified manage_na.R
  • Added to NAMESPACE

OpenSpecy 1.0.6

CRAN release: 2023-11-25

Minor Improvements

  • Add attributes to OpenSpecy objects
  • More flexible sig_noise()
  • Simpler matching

OpenSpecy 1.0.5

CRAN release: 2023-10-31

Minor Improvements

  • Support .tsv files

Bug Fixes

  • Flip xy coordinates in ENVI files

OpenSpecy 1.0.4

CRAN release: 2023-10-02

Minor Improvements

  • More contributors
  • showlegend argument for interactive plots

Bug Fixes

  • Fixes a fatal error in match_spec() probably causing incorrect identifications

OpenSpecy 1.0.3

CRAN release: 2023-09-13

Minor Improvements

OpenSpecy 1.0.2

CRAN release: 2023-09-05

Bug Fixes

  • Set data.table threads to 2 for (CRAN) checks

OpenSpecy 1.0.1

Bug Fixes

  • Fixed spelling mistakes
  • Reduced example and test run times for CRAN

OpenSpecy 1.0.0

New Features

  • Complete package, app, and SOP overhaul!
  • The Shiny app has been outsourced to an own GitHub repository: https://github.com/wincowgerDEV/OpenSpecy-shiny
  • Spectra are now stored in dedicated OpenSpecy objects, which can be managed with a set of new functions including c_spec() for concatenating spectra or converting them back to tables
  • Various functions have been renamed and improved, for instance, to facilitate reading (and writing) spectral files
  • New functions include def_features() to identify microplastics in spectral maps and ai_classify() to use AI for matching/identifying spectra

Minor Improvements

  • Added pkgdown documentation
  • Added code coverage tests

OpenSpecy 0.9.5

CRAN release: 2022-07-06

Bug Fixes

  • Fixed outdated links and redirects

OpenSpecy 0.9.4

Minor Improvements

  • UI improvements
  • Gitter support

Bug Fixes

  • Fixed invalid regex failing CRAN checks

OpenSpecy 0.9.3

CRAN release: 2021-10-13

Minor Improvements

  • Better error handling for .csv formats
  • Add funders and goals
  • Updated package citation
  • CI testing for Mac

Bug Fixes

  • Fixed testthat routines occasionally failing CRAN checks

OpenSpecy 0.9.2

CRAN release: 2021-05-20

New Features

  • Manual baseline corrections
  • Citable technical note

Minor Improvements

  • More generic .spa file reading
  • Added funding

Bug Fixes

  • UI improvements

OpenSpecy 0.9.1

CRAN release: 2021-04-11

Bug Fixes

  • Checks fail gracefully if api.osf.io is not reachable
  • Adjust UI selectors to comply with inverse axis and not exceed ranges

OpenSpecy 0.9.0

CRAN release: 2021-04-09

New Features

  • UI overhaul
  • Give more control to the user when starting via run_app()

Minor Improvements

  • Reverse spectral axes to comply with most wavenumber scales
  • Let users select metadata license
  • Improved data sharing and logging capabilities
  • Google Analytics removed

Bug Fixes

  • Use tempdir for unit tests and examples

OpenSpecy 0.8.2

CRAN release: 2021-03-31

Minor Improvements

  • Compliance with CRAN style guide
  • More references with DOIs
  • Better error/warning messages during Shiny file input

Bug Fixes

  • Fixed bug with Shiny reactive values

OpenSpecy 0.8.1

Bug Fixes

  • Fix redirecting URLs

OpenSpecy 0.8.0

New Features

  • Use external Open Specy libraries from OSF
  • read_asp() for reading Agilent .asp files
  • GUI overhaul
  • Comprehensive package vignette and function documentation
  • Unit testing for main functions

Minor Improvements

  • Better error handling
  • Stripped down dependencies

OpenSpecy 0.7.0

  • Transferred code base from openspecy.org to this R package